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Load Data
## Rows: 36128 Columns: 39
## ── Column specification ────────────────────────────────────────────────────────
## Delimiter: "\t"
## chr (3): Gene, GeneID, Coordinates
## dbl (36): ex0hr_1, ex0hr_2, ex24hr_1, ex24hr_2, ex48hr_1, ex48hr_2, ex72hr_1...
##
## ℹ Use `spec()` to retrieve the full column specification for this data.
## ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message.## # A tibble: 6 × 39
## Gene GeneID Coordinates ex0hr_1 ex0hr_2 ex24hr_1 ex24hr_2 ex48hr_1 ex48hr_2
## <chr> <chr> <chr> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl>
## 1 ENSMUS… Gnai3 3:10791019… 2.50 2.21 7.19 5.93 10.3 7.64
## 2 ENSMUS… Pbsn X:75083239… 0 0 0 0 0 0
## 3 ENSMUS… Cdc45 16:1878053… 0.814 1.58 0.675 1.46 1.15 1.33
## 4 ENSMUS… Scml2 X:15755512… 0.115 0.133 0.0782 0.189 0.116 0.138
## 5 ENSMUS… Apoh 11:1082046… 0.804 0.0901 0.0345 0 0.114 0
## 6 ENSMUS… Narf 11:1210985… 43.8 41.3 28.5 33.5 23.5 22.9
## # … with 30 more variables: ex72hr_1 <dbl>, ex72hr_2 <dbl>, vP0_1 <dbl>,
## # vP0_2 <dbl>, vP4_1 <dbl>, vP4_2 <dbl>, vP7_1 <dbl>, vP7_2 <dbl>,
## # vAd_1 <dbl>, vAd_2 <dbl>, vD1S_1 <dbl>, vD1S_2 <dbl>, vD1R_1 <dbl>,
## # vD1R_2 <dbl>, vD7R_1 <dbl>, vD7R_2 <dbl>, vD7S_1 <dbl>, vD7S_2 <dbl>,
## # iP0_1 <dbl>, iP0_2 <dbl>, iP0_3 <dbl>, iP4_1 <dbl>, iP4_2 <dbl>,
## # iP4_3 <dbl>, iD7S_1 <dbl>, iD7S_2 <dbl>, iD7S_3 <dbl>, iD7R_1 <dbl>,
## # iD7R_2 <dbl>, iD7R_3 <dbl>Sample Info Exploration
cs <- column_summary(data)## Warning: `summarise_each_()` was deprecated in dplyr 0.7.0.
## ℹ Please use `across()` instead.
## ℹ The deprecated feature was likely used in the dplyr package.
## Please report the issue at <https://github.com/tidyverse/dplyr/issues>.
## This warning is displayed once every 8 hours.
## Call `lifecycle::last_lifecycle_warnings()` to see where this warning was
## generated.## Warning: `funs()` was deprecated in dplyr 0.8.0.
## ℹ Please use a list of either functions or lambdas:
##
## # Simple named list: list(mean = mean, median = median)
##
## # Auto named with `tibble::lst()`: tibble::lst(mean, median)
##
## # Using lambdas list(~ mean(., trim = .2), ~ median(., na.rm = TRUE))
## This warning is displayed once every 8 hours.
## Call `lifecycle::last_lifecycle_warnings()` to see where this warning was
## generated.print(cs)